Requests metadata about Cromwell workflow jobs during a time period specified

Usage

cromwell_jobs(
  days = 1,
  workflow_name = NULL,
  workflow_status = NULL,
  url = cw_url(),
  token = NULL
)

Arguments

days: The number of days of history to return, defaults to 1 day.
workflow_name: An array of strings of valid workflow names you want in your job list.
workflow_status: A array of strings of valid workflow statuses you want in your job list (e.g., submitted, running, succeeded, failed, aborting, aborted)
url: (character) base url for your Cromwell server. optional. if not supplied set the url as the env var CROMWELLURL
token: (character) we do not recommend passing your token here as a string. Either pass it using Sys.getenv() or save your token as the env var PROOF_TOKEN and then passing nothing to this param and we'll find it

Value

a tibble of metadata on workflow jobs submitted; each row is a different job. columns:

end (dttm)
workflow_id (chr)
metadataArchiveStatus (chr)
workflow_name (chr)
start (dttm)
status (chr)
submission (dttm)
workflowDuration (dbl)

Important

Requires valid Cromwell server URL to be set. See cromwell_settings

Author

Amy Paguirigan, Scott Chamberlain

Examples

if (FALSE) { # \dontrun{
## Request what jobs have been submitted to your Cromwell instance in the
## past 7 days.
recentJobs <- cromwell_jobs(days = 7)
} # }